Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm37259-201ENSMUST00000193903 849 ntBASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Olfr582-201ENSMUST00000098212 960 ntBASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm25668-201ENSMUST00000157700 129 ntBASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf20Q5DTM8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Gm25700-201ENSMUST00000177693 110 ntBASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Gm44967-201ENSMUST00000207047 631 ntBASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf20Q5DTM8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf20Q5DTM8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms