Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tmem40Q4FJU9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tmem40Q4FJU9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
Tmem40Q4FJU9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tmem40Q4FJU9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm12015-201ENSMUST00000117065 843 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm14665-201ENSMUST00000122294 557 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm27438-201ENSMUST00000183480 110 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm37751-201ENSMUST00000192440 1198 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm5051-201ENSMUST00000204085 485 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 AC154252.1-201ENSMUST00000226041 473 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem40Q4FJU9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Gm24231-201ENSMUST00000104315 133 ntBASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms