Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm24231-201ENSMUST00000104315 133 ntBASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm6415-201ENSMUST00000118488 348 ntBASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm27622-201ENSMUST00000183779 60 ntBASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm7390-201ENSMUST00000212452 1216 ntBASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm8420-201ENSMUST00000097103 598 ntBASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cks1brtQ3UNC9 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 AC121870.2-201ENSMUST00000214343 1870 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Gm43999-201ENSMUST00000204286 2889 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Gm11524-201ENSMUST00000119349 807 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Gm23363-201ENSMUST00000175024 79 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Mir6990-201ENSMUST00000183724 91 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Gm45683-201ENSMUST00000210825 1247 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 CT010486.3-201ENSMUST00000224555 811 ntBASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cks1brtQ3UNC9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms