Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm28937-201ENSMUST00000185413 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm29400-201ENSMUST00000187208 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm28662-201ENSMUST00000188446 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm28251-201ENSMUST00000188835 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm37318-201ENSMUST00000194325 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm38017-201ENSMUST00000194768 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm37287-201ENSMUST00000195449 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm37793-201ENSMUST00000195548 695 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm8342-201ENSMUST00000209839 757 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm19009-201ENSMUST00000223072 823 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upf3aQ3ULJ3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Upf3aQ3ULJ3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Upf3aQ3ULJ3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.52□□□□□ -0.4
Upf3aQ3ULJ3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Upf3aQ3ULJ3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Upf3aQ3ULJ3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.52□□□□□ -0.4
Upf3aQ3ULJ3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm8459-201ENSMUST00000162504 760 ntBASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm8531-201ENSMUST00000188319 893 ntBASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm37981-201ENSMUST00000194280 535 ntBASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Gm5451-201ENSMUST00000080545 579 ntBASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upf3aQ3ULJ3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm23272-201ENSMUST00000104053 129 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm19091-201ENSMUST00000208120 978 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms