Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.87□□□□□ -0.35
Snx27Q3UHD6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.87□□□□□ -0.35
Snx27Q3UHD6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm24844-201ENSMUST00000158679 127 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm3150-201ENSMUST00000166418 204 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm12407-201ENSMUST00000180219 324 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Mir8115-201ENSMUST00000184992 119 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Gm45398-201ENSMUST00000210561 165 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Cog3-203ENSMUST00000227473 4197 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snx27Q3UHD6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Gm11667-201ENSMUST00000119828 486 ntBASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.85□□□□□ -0.35
Snx27Q3UHD6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snx27Q3UHD6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms