Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf180Q3U827 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf180Q3U827 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rnf180Q3U827 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rnf180Q3U827 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Gm8302-201ENSMUST00000119217 852 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 Gm13505-201ENSMUST00000121666 817 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Mir1941-201ENSMUST00000157834 83 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 Gm7833-201ENSMUST00000183288 990 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 Gm37597-201ENSMUST00000191853 382 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 Gm37009-201ENSMUST00000193297 361 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf180Q3U827 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 AC163646.3-201ENSMUST00000228879 772 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf180Q3U827 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.82□□□□□ -0.2
Rnf180Q3U827 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf180Q3U827 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm13777-201ENSMUST00000118208 345 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm25288-201ENSMUST00000122800 265 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm25591-201ENSMUST00000177317 94 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm19918-201ENSMUST00000194858 400 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm9701-201ENSMUST00000077976 427 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.81□□□□□ -0.2
Rnf180Q3U827 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf180Q3U827 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rnf180Q3U827 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.8□□□□□ -0.2
Rnf180Q3U827 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.8□□□□□ -0.2
Rnf180Q3U827 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf180Q3U827 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rnf180Q3U827 H2afy3-201ENSMUST00000151919 1112 ntBASIC13.8□□□□□ -0.2
Rnf180Q3U827 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC13.8□□□□□ -0.2
Rnf180Q3U827 n-R5s130-201ENSMUST00000178128 119 ntBASIC13.8□□□□□ -0.2
Rnf180Q3U827 Gm24312-201ENSMUST00000178677 119 ntBASIC13.8□□□□□ -0.2
Rnf180Q3U827 n-R5s106-201ENSMUST00000179060 119 ntBASIC13.8□□□□□ -0.2
Rnf180Q3U827 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rnf180Q3U827 n-R5s118-201ENSMUST00000179887 119 ntBASIC13.8□□□□□ -0.2
Rnf180Q3U827 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms