Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Gm10312-201ENSMUST00000078515 489 ntBASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cul4aQ3TCH7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm29396-201ENSMUST00000185659 716 ntBASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm45880-201ENSMUST00000213041 853 ntBASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Gm10254-201ENSMUST00000052888 867 ntBASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cul4aQ3TCH7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cul4aQ3TCH7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Cul4aQ3TCH7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms