Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Q3KNL4 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Gm15610-201ENSMUST00000120584 195 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.68□□□□□ -0.54
Q3KNL4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.68□□□□□ -0.54
Q3KNL4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.68□□□□□ -0.54
Q3KNL4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.68□□□□□ -0.54
Q3KNL4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Gm37489-201ENSMUST00000191883 159 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Gm38002-201ENSMUST00000193255 180 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Gm43433-201ENSMUST00000196573 481 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Gm43118-201ENSMUST00000199149 775 ntBASIC11.68□□□□□ -0.54
Q3KNL4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Q3KNL4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Q3KNL4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3KNL4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3KNL4 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.67□□□□□ -0.54
Q3KNL4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.67□□□□□ -0.54
Q3KNL4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Gm24845-201ENSMUST00000158034 109 ntBASIC11.67□□□□□ -0.54
Q3KNL4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.67□□□□□ -0.54
Q3KNL4 Gm38158-201ENSMUST00000194617 339 ntBASIC11.67□□□□□ -0.54
Q3KNL4 Gm42627-201ENSMUST00000197347 224 ntBASIC11.67□□□□□ -0.54
Q3KNL4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Gm17931-201ENSMUST00000208132 634 ntBASIC11.67□□□□□ -0.54
Q3KNL4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Q3KNL4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms