Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm3150-201ENSMUST00000166418 204 ntBASIC12.88□□□□□ -0.35
Col9a2Q07643 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Col9a2Q07643 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Gm12036-201ENSMUST00000120008 530 ntBASIC12.87□□□□□ -0.35
Col9a2Q07643 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.87□□□□□ -0.35
Col9a2Q07643 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.87□□□□□ -0.35
Col9a2Q07643 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Col9a2Q07643 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Col9a2Q07643 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.87□□□□□ -0.35
Col9a2Q07643 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a2Q07643 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.86□□□□□ -0.35
Col9a2Q07643 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Gm13888-201ENSMUST00000119148 422 ntBASIC12.86□□□□□ -0.35
Col9a2Q07643 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col9a2Q07643 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.86□□□□□ -0.35
Col9a2Q07643 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms