Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.24□□□□□ -0.93
Cdx4Q07424 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm11597-201ENSMUST00000121423 964 ntBASIC9.24□□□□□ -0.93
Cdx4Q07424 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm18827-201ENSMUST00000188341 790 ntBASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm18304-201ENSMUST00000189162 546 ntBASIC9.24□□□□□ -0.93
Cdx4Q07424 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm18753-201ENSMUST00000201000 566 ntBASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx4Q07424 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cdx4Q07424 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx4Q07424 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx4Q07424 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Gm13570-201ENSMUST00000140763 309 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx4Q07424 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.23□□□□□ -0.93
Cdx4Q07424 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx4Q07424 Rn7s1-201ENSMUST00000174924 300 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 Rn7s2-201ENSMUST00000175032 300 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 Gm26461-201ENSMUST00000175064 290 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx4Q07424 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Rps4l-202ENSMUST00000204242 789 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.23□□□□□ -0.93
Cdx4Q07424 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.23□□□□□ -0.93
Cdx4Q07424 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Cdx4Q07424 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx4Q07424 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.22□□□□□ -0.93
Cdx4Q07424 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx4Q07424 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.22□□□□□ -0.93
Cdx4Q07424 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms