Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.99□□□□□ -0.49
Pfdn6Q03958 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.99□□□□□ -0.49
Pfdn6Q03958 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pfdn6Q03958 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Gm23270-201ENSMUST00000104055 131 ntBASIC11.98□□□□□ -0.49
Pfdn6Q03958 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Gm14109-201ENSMUST00000118814 309 ntBASIC11.98□□□□□ -0.49
Pfdn6Q03958 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Gm3961-201ENSMUST00000204425 994 ntBASIC11.98□□□□□ -0.49
Pfdn6Q03958 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.98□□□□□ -0.49
Pfdn6Q03958 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.98□□□□□ -0.49
Pfdn6Q03958 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pfdn6Q03958 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.97□□□□□ -0.49
Pfdn6Q03958 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.97□□□□□ -0.49
Pfdn6Q03958 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.97□□□□□ -0.49
Pfdn6Q03958 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfdn6Q03958 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms