Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.52□□□□□ -0.57
Msx2Q03358 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Msx2Q03358 Gm13342-201ENSMUST00000121055 207 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 Gm27847-201ENSMUST00000183711 107 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 Gm27375-201ENSMUST00000183799 107 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.52□□□□□ -0.57
Msx2Q03358 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.52□□□□□ -0.57
Msx2Q03358 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Msx2Q03358 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.52□□□□□ -0.57
Msx2Q03358 Gm6091-201ENSMUST00000098307 165 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Msx2Q03358 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.52□□□□□ -0.57
Msx2Q03358 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.52□□□□□ -0.57
Msx2Q03358 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Msx2Q03358 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.51□□□□□ -0.57
Msx2Q03358 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.51□□□□□ -0.57
Msx2Q03358 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.51□□□□□ -0.57
Msx2Q03358 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.51□□□□□ -0.57
Msx2Q03358 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.51□□□□□ -0.57
Msx2Q03358 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm6222-202ENSMUST00000182143 629 ntBASIC11.51□□□□□ -0.57
Msx2Q03358 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.51□□□□□ -0.57
Msx2Q03358 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm7561-201ENSMUST00000211203 886 ntBASIC11.51□□□□□ -0.57
Msx2Q03358 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Gm17794-201ENSMUST00000220252 955 ntBASIC11.51□□□□□ -0.57
Msx2Q03358 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.51□□□□□ -0.57
Msx2Q03358 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.51□□□□□ -0.57
Msx2Q03358 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Msx2Q03358 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Msx2Q03358 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms