Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
GabpaQ00422 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.5□□□□□ -0.25
GabpaQ00422 Mir7076-201ENSMUST00000183519 74 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm27910-201ENSMUST00000185004 107 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm28937-201ENSMUST00000185413 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm29400-201ENSMUST00000187208 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm28662-201ENSMUST00000188446 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm28251-201ENSMUST00000188835 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm37458-201ENSMUST00000194055 410 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm37318-201ENSMUST00000194325 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm38017-201ENSMUST00000194768 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm37287-201ENSMUST00000195449 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm37793-201ENSMUST00000195548 695 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.5□□□□□ -0.25
GabpaQ00422 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.5□□□□□ -0.25
GabpaQ00422 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm2517-201ENSMUST00000215651 348 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
GabpaQ00422 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
GabpaQ00422 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
GabpaQ00422 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
GabpaQ00422 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.49□□□□□ -0.25
GabpaQ00422 Gm8459-201ENSMUST00000162504 760 ntBASIC13.49□□□□□ -0.25
GabpaQ00422 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.49□□□□□ -0.25
GabpaQ00422 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
GabpaQ00422 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.49□□□□□ -0.25
GabpaQ00422 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
GabpaQ00422 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.49□□□□□ -0.25
GabpaQ00422 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Gm6108-201ENSMUST00000208365 367 ntBASIC13.49□□□□□ -0.25
GabpaQ00422 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GabpaQ00422 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
GabpaQ00422 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GabpaQ00422 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GabpaQ00422 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GabpaQ00422 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GabpaQ00422 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
GabpaQ00422 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
GabpaQ00422 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
GabpaQ00422 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GabpaQ00422 Gm27390-201ENSMUST00000184516 176 ntBASIC13.48□□□□□ -0.25
GabpaQ00422 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
GabpaQ00422 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.48□□□□□ -0.25
GabpaQ00422 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.48□□□□□ -0.25
GabpaQ00422 Gm9136-201ENSMUST00000193368 454 ntBASIC13.48□□□□□ -0.25
GabpaQ00422 Gm45219-201ENSMUST00000205602 465 ntBASIC13.48□□□□□ -0.25
GabpaQ00422 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.48□□□□□ -0.25
GabpaQ00422 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GabpaQ00422 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.48□□□□□ -0.25
GabpaQ00422 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GabpaQ00422 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms