Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm44124-201ENSMUST00000204159 472 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gm44882-201ENSMUST00000205702 802 ntBASIC11.3□□□□□ -0.6
Nkx3-2P97503 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx3-2P97503 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Gm26286-201ENSMUST00000104166 134 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Gm11941-201ENSMUST00000119904 610 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Gm11450-201ENSMUST00000121144 333 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.29□□□□□ -0.6
Nkx3-2P97503 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkx3-2P97503 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms