Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43cP86449 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trim43cP86449 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43cP86449 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim43cP86449 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim43cP86449 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Gm29615-201ENSMUST00000185371 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm28224-201ENSMUST00000186078 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm29001-201ENSMUST00000186177 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm28292-201ENSMUST00000186593 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm28101-201ENSMUST00000187608 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm29076-201ENSMUST00000187689 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm28302-201ENSMUST00000187931 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm28646-201ENSMUST00000188220 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm28205-201ENSMUST00000189177 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm29032-201ENSMUST00000189797 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm28695-201ENSMUST00000190300 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Gm37448-201ENSMUST00000192795 697 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim43cP86449 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim43cP86449 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.93□□□□□ -0.34
Trim43cP86449 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim43cP86449 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43cP86449 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim43cP86449 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim43cP86449 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim43cP86449 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Gm11660-201ENSMUST00000120955 412 ntBASIC12.92□□□□□ -0.34
Trim43cP86449 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43cP86449 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim43cP86449 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim43cP86449 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim43cP86449 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.92□□□□□ -0.34
Trim43cP86449 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim43cP86449 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.92□□□□□ -0.34
Trim43cP86449 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim43cP86449 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Gm4157-201ENSMUST00000211647 679 ntBASIC12.92□□□□□ -0.34
Trim43cP86449 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim43cP86449 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43cP86449 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trim43cP86449 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.92□□□□□ -0.34
Trim43cP86449 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43cP86449 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim43cP86449 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms