Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Gm6114-201ENSMUST00000182472 968 ntBASIC10.29□□□□□ -0.76
Otx1P80205 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.29□□□□□ -0.76
Otx1P80205 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.29□□□□□ -0.76
Otx1P80205 Gm45186-201ENSMUST00000206874 478 ntBASIC10.29□□□□□ -0.76
Otx1P80205 Gm44967-201ENSMUST00000207047 631 ntBASIC10.29□□□□□ -0.76
Otx1P80205 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.29□□□□□ -0.76
Otx1P80205 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.29□□□□□ -0.76
Otx1P80205 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.29□□□□□ -0.76
Otx1P80205 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.29□□□□□ -0.76
Otx1P80205 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.29□□□□□ -0.76
Otx1P80205 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Otx1P80205 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Otx1P80205 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Otx1P80205 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Otx1P80205 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.28□□□□□ -0.76
Otx1P80205 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Otx1P80205 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Otx1P80205 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Otx1P80205 Gm9192-201ENSMUST00000183221 985 ntBASIC10.28□□□□□ -0.76
Otx1P80205 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.28□□□□□ -0.76
Otx1P80205 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Otx1P80205 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.28□□□□□ -0.76
Otx1P80205 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.28□□□□□ -0.76
Otx1P80205 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Otx1P80205 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Otx1P80205 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.28□□□□□ -0.76
Otx1P80205 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Otx1P80205 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Otx1P80205 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.28□□□□□ -0.76
Otx1P80205 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Otx1P80205 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Otx1P80205 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Otx1P80205 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Otx1P80205 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.76
Otx1P80205 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Otx1P80205 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.27□□□□□ -0.76
Otx1P80205 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.27□□□□□ -0.76
Otx1P80205 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Otx1P80205 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Otx1P80205 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Otx1P80205 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Otx1P80205 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.27□□□□□ -0.77
Otx1P80205 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otx1P80205 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.27□□□□□ -0.77
Otx1P80205 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Otx1P80205 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.27□□□□□ -0.77
Otx1P80205 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms