Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CiitaP79621 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CiitaP79621 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
CiitaP79621 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.88□□□□□ -0.35
CiitaP79621 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CiitaP79621 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Gm15566-201ENSMUST00000121130 590 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.88□□□□□ -0.35
CiitaP79621 Gm45113-201ENSMUST00000207518 165 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Gm7940-201ENSMUST00000218195 769 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
CiitaP79621 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CiitaP79621 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CiitaP79621 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.88□□□□□ -0.35
CiitaP79621 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CiitaP79621 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CiitaP79621 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CiitaP79621 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CiitaP79621 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CiitaP79621 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.87□□□□□ -0.35
CiitaP79621 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Gm22144-201ENSMUST00000157402 102 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CiitaP79621 Gm29499-201ENSMUST00000189151 486 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Gm28329-201ENSMUST00000191208 689 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Gm29171-201ENSMUST00000191397 486 ntBASIC12.87□□□□□ -0.35
CiitaP79621 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.87□□□□□ -0.35
CiitaP79621 Gm45770-201ENSMUST00000212105 616 ntBASIC12.87□□□□□ -0.35
CiitaP79621 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.87□□□□□ -0.35
CiitaP79621 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.87□□□□□ -0.35
CiitaP79621 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CiitaP79621 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CiitaP79621 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CiitaP79621 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.87□□□□□ -0.35
CiitaP79621 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms