Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm43758-201ENSMUST00000199500 367 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Gm43822-201ENSMUST00000200285 476 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm4607-201ENSMUST00000206649 577 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Lsm6P62313 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.47□□□□□ -0.73
Lsm6P62313 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Lsm6P62313 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.46□□□□□ -0.73
Lsm6P62313 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.46□□□□□ -0.73
Lsm6P62313 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Lsm6P62313 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Gm13296-201ENSMUST00000117854 997 ntBASIC10.46□□□□□ -0.73
Lsm6P62313 Gm14723-201ENSMUST00000118686 215 ntBASIC10.46□□□□□ -0.73
Lsm6P62313 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.46□□□□□ -0.73
Lsm6P62313 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.46□□□□□ -0.73
Lsm6P62313 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.46□□□□□ -0.73
Lsm6P62313 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.46□□□□□ -0.73
Lsm6P62313 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.46□□□□□ -0.73
Lsm6P62313 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Lsm6P62313 Gm38317-201ENSMUST00000195564 343 ntBASIC10.46□□□□□ -0.73
Lsm6P62313 Gm19287-201ENSMUST00000203190 358 ntBASIC10.46□□□□□ -0.73
Lsm6P62313 Gm43962-201ENSMUST00000203898 190 ntBASIC10.46□□□□□ -0.73
Lsm6P62313 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm6P62313 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.46□□□□□ -0.73
Lsm6P62313 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Lsm6P62313 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.46□□□□□ -0.74
Lsm6P62313 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Lsm6P62313 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm6P62313 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Lsm6P62313 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm6P62313 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.45□□□□□ -0.74
Lsm6P62313 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Lsm6P62313 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm6P62313 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms