Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Tubgcp3P58854 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gm38341-201ENSMUST00000195357 515 ntBASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gm44364-201ENSMUST00000198368 141 ntBASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gm45598-202ENSMUST00000210719 986 ntBASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.16□□□□□ -0.46
Tubgcp3P58854 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.16□□□□□ -0.46
Tubgcp3P58854 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.16□□□□□ -0.46
Tubgcp3P58854 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.16□□□□□ -0.46
Tubgcp3P58854 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tubgcp3P58854 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.15□□□□□ -0.46
Tubgcp3P58854 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm24255-201ENSMUST00000104481 128 ntBASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm18893-201ENSMUST00000198416 943 ntBASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm43758-201ENSMUST00000199500 367 ntBASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm43822-201ENSMUST00000200285 476 ntBASIC12.15□□□□□ -0.46
Tubgcp3P58854 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.15□□□□□ -0.46
Tubgcp3P58854 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubgcp3P58854 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.15□□□□□ -0.46
Tubgcp3P58854 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tubgcp3P58854 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tubgcp3P58854 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tubgcp3P58854 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Tubgcp3P58854 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tubgcp3P58854 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Tubgcp3P58854 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubgcp3P58854 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms