Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.6□□□□□ -0.87
Sssca1P56873 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm11478-201ENSMUST00000117851 599 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Gm12490-201ENSMUST00000120255 560 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.6□□□□□ -0.87
Sssca1P56873 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm16379-201ENSMUST00000161469 348 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.6□□□□□ -0.87
Sssca1P56873 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm6222-202ENSMUST00000182143 629 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Gm8762-201ENSMUST00000193486 339 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.6□□□□□ -0.87
Sssca1P56873 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Sssca1P56873 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.6□□□□□ -0.87
Sssca1P56873 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.6□□□□□ -0.87
Sssca1P56873 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.6□□□□□ -0.87
Sssca1P56873 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.6□□□□□ -0.87
Sssca1P56873 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Sssca1P56873 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.59□□□□□ -0.87
Sssca1P56873 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.59□□□□□ -0.87
Sssca1P56873 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.59□□□□□ -0.87
Sssca1P56873 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.59□□□□□ -0.87
Sssca1P56873 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.59□□□□□ -0.87
Sssca1P56873 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.59□□□□□ -0.87
Sssca1P56873 Gm5706-201ENSMUST00000181525 993 ntBASIC9.59□□□□□ -0.87
Sssca1P56873 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Sssca1P56873 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms