Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CckbrP56481 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CckbrP56481 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CckbrP56481 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
CckbrP56481 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
CckbrP56481 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CckbrP56481 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CckbrP56481 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CckbrP56481 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CckbrP56481 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CckbrP56481 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CckbrP56481 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CckbrP56481 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CckbrP56481 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.06□□□□□ -0.64
CckbrP56481 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CckbrP56481 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.05□□□□□ -0.64
CckbrP56481 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.05□□□□□ -0.64
CckbrP56481 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
CckbrP56481 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
CckbrP56481 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CckbrP56481 Gm26286-201ENSMUST00000104166 134 ntBASIC11.05□□□□□ -0.64
CckbrP56481 Gm15808-201ENSMUST00000119046 604 ntBASIC11.05□□□□□ -0.64
CckbrP56481 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.05□□□□□ -0.64
CckbrP56481 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CckbrP56481 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.05□□□□□ -0.64
CckbrP56481 Gm4607-201ENSMUST00000206649 577 ntBASIC11.05□□□□□ -0.64
CckbrP56481 Gm17827-201ENSMUST00000211825 742 ntBASIC11.05□□□□□ -0.64
CckbrP56481 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.05□□□□□ -0.64
CckbrP56481 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CckbrP56481 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CckbrP56481 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CckbrP56481 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.04□□□□□ -0.64
CckbrP56481 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.04□□□□□ -0.64
CckbrP56481 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CckbrP56481 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CckbrP56481 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CckbrP56481 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
CckbrP56481 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CckbrP56481 Gm14017-201ENSMUST00000121934 386 ntBASIC11.04□□□□□ -0.64
CckbrP56481 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.04□□□□□ -0.64
CckbrP56481 Gm44262-201ENSMUST00000204969 372 ntBASIC11.04□□□□□ -0.64
CckbrP56481 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.04□□□□□ -0.64
CckbrP56481 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CckbrP56481 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms