Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm5419-201ENSMUST00000119301 527 ntBASIC12.68□□□□□ -0.38
NrlP54846 Gm8815-201ENSMUST00000173809 620 ntBASIC12.68□□□□□ -0.38
NrlP54846 Mir6958-201ENSMUST00000184207 73 ntBASIC12.68□□□□□ -0.38
NrlP54846 Gm27910-201ENSMUST00000185004 107 ntBASIC12.68□□□□□ -0.38
NrlP54846 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.68□□□□□ -0.38
NrlP54846 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.68□□□□□ -0.38
NrlP54846 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.68□□□□□ -0.38
NrlP54846 Gm34023-201ENSMUST00000195539 217 ntBASIC12.68□□□□□ -0.38
NrlP54846 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.68□□□□□ -0.38
NrlP54846 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.68□□□□□ -0.38
NrlP54846 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.68□□□□□ -0.38
NrlP54846 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.68□□□□□ -0.38
NrlP54846 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
NrlP54846 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.68□□□□□ -0.38
NrlP54846 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NrlP54846 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.68□□□□□ -0.38
NrlP54846 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NrlP54846 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.68□□□□□ -0.38
NrlP54846 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.68□□□□□ -0.38
NrlP54846 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NrlP54846 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NrlP54846 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.67□□□□□ -0.38
NrlP54846 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.67□□□□□ -0.38
NrlP54846 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
NrlP54846 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NrlP54846 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.67□□□□□ -0.38
NrlP54846 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.67□□□□□ -0.38
NrlP54846 Gm12516-201ENSMUST00000120819 385 ntBASIC12.67□□□□□ -0.38
NrlP54846 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.67□□□□□ -0.38
NrlP54846 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm23045-201ENSMUST00000175041 96 ntBASIC12.67□□□□□ -0.38
NrlP54846 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.67□□□□□ -0.38
NrlP54846 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.67□□□□□ -0.38
NrlP54846 Gm29155-201ENSMUST00000185910 269 ntBASIC12.67□□□□□ -0.38
NrlP54846 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm7593-201ENSMUST00000187246 644 ntBASIC12.67□□□□□ -0.38
NrlP54846 Gm44124-201ENSMUST00000204159 472 ntBASIC12.67□□□□□ -0.38
NrlP54846 Gm44882-201ENSMUST00000205702 802 ntBASIC12.67□□□□□ -0.38
NrlP54846 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.67□□□□□ -0.38
NrlP54846 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
NrlP54846 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.67□□□□□ -0.38
NrlP54846 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NrlP54846 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NrlP54846 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NrlP54846 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NrlP54846 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.67□□□□□ -0.38
NrlP54846 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NrlP54846 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.67□□□□□ -0.38
NrlP54846 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NrlP54846 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.66□□□□□ -0.38
NrlP54846 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Gm14193-201ENSMUST00000105067 153 ntBASIC12.66□□□□□ -0.38
NrlP54846 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.66□□□□□ -0.38
NrlP54846 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NrlP54846 Gm11451-201ENSMUST00000118946 630 ntBASIC12.66□□□□□ -0.38
NrlP54846 Gm15004-201ENSMUST00000119192 630 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms