Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.04□□□□□ -0.48
Lhx3P50481 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.04□□□□□ -0.48
Lhx3P50481 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lhx3P50481 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx3P50481 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm12165-201ENSMUST00000117047 342 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Gm13916-201ENSMUST00000117368 628 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Gm11783-201ENSMUST00000119549 885 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Gm20426-201ENSMUST00000173657 440 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm38314-201ENSMUST00000195709 625 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Gm5982-201ENSMUST00000196234 512 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Gm43138-201ENSMUST00000199123 708 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm6905-201ENSMUST00000205729 511 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.03□□□□□ -0.48
Lhx3P50481 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Ginm1-202ENSMUST00000065124 300 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lhx3P50481 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.03□□□□□ -0.48
Lhx3P50481 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lhx3P50481 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx3P50481 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Lhx3P50481 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.02□□□□□ -0.48
Lhx3P50481 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Lhx3P50481 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.02□□□□□ -0.48
Lhx3P50481 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.02□□□□□ -0.48
Lhx3P50481 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lhx3P50481 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lhx3P50481 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lhx3P50481 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lhx3P50481 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lhx3P50481 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Lhx3P50481 Gm9062-201ENSMUST00000117712 727 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Gm8731-201ENSMUST00000118088 412 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Gm11700-201ENSMUST00000119409 403 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Gm11331-201ENSMUST00000119764 288 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.02□□□□□ -0.49
Lhx3P50481 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lhx3P50481 Mir8093-201ENSMUST00000185043 137 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Gm37835-201ENSMUST00000193305 361 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Gm38151-201ENSMUST00000195085 289 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lhx3P50481 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lhx3P50481 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.02□□□□□ -0.49
Lhx3P50481 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lhx3P50481 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms