Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LtbrP50284 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LtbrP50284 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.13□□□□□ -0.15
LtbrP50284 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LtbrP50284 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LtbrP50284 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LtbrP50284 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.12□□□□□ -0.15
LtbrP50284 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Gm13916-201ENSMUST00000117368 628 ntBASIC14.12□□□□□ -0.15
LtbrP50284 Gm4732-201ENSMUST00000118778 473 ntBASIC14.12□□□□□ -0.15
LtbrP50284 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.12□□□□□ -0.15
LtbrP50284 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.12□□□□□ -0.15
LtbrP50284 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
LtbrP50284 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LtbrP50284 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LtbrP50284 Gm28686-201ENSMUST00000187404 609 ntBASIC14.12□□□□□ -0.15
LtbrP50284 Gm8581-201ENSMUST00000188636 890 ntBASIC14.12□□□□□ -0.15
LtbrP50284 Gm5100-201ENSMUST00000195631 589 ntBASIC14.12□□□□□ -0.15
LtbrP50284 Gm45856-201ENSMUST00000212752 416 ntBASIC14.12□□□□□ -0.15
LtbrP50284 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.12□□□□□ -0.15
LtbrP50284 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LtbrP50284 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LtbrP50284 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.12□□□□□ -0.15
LtbrP50284 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LtbrP50284 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.12□□□□□ -0.15
LtbrP50284 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.12□□□□□ -0.15
LtbrP50284 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LtbrP50284 Gm5403-201ENSMUST00000117105 2795 ntBASIC14.11□□□□□ -0.15
LtbrP50284 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.11□□□□□ -0.15
LtbrP50284 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
LtbrP50284 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.11□□□□□ -0.15
LtbrP50284 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LtbrP50284 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Gm15703-201ENSMUST00000120250 880 ntBASIC14.11□□□□□ -0.15
LtbrP50284 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LtbrP50284 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.11□□□□□ -0.15
LtbrP50284 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
LtbrP50284 Gm8190-201ENSMUST00000199603 586 ntBASIC14.11□□□□□ -0.15
LtbrP50284 Gm18059-201ENSMUST00000208073 580 ntBASIC14.11□□□□□ -0.15
LtbrP50284 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Gm19189-201ENSMUST00000221689 754 ntBASIC14.11□□□□□ -0.15
LtbrP50284 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
LtbrP50284 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LtbrP50284 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
LtbrP50284 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.11□□□□□ -0.15
LtbrP50284 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LtbrP50284 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC14.11□□□□□ -0.15
LtbrP50284 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LtbrP50284 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.11□□□□□ -0.15
LtbrP50284 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LtbrP50284 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LtbrP50284 Matn2-203ENSMUST00000226766 3252 ntBASIC14.1□□□□□ -0.15
LtbrP50284 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms