Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.85□□□□□ -0.83
Nkx2-1P50220 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Gm12314-201ENSMUST00000118104 538 ntBASIC9.85□□□□□ -0.83
Nkx2-1P50220 Gm11439-201ENSMUST00000118598 409 ntBASIC9.85□□□□□ -0.83
Nkx2-1P50220 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.85□□□□□ -0.83
Nkx2-1P50220 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.85□□□□□ -0.83
Nkx2-1P50220 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.85□□□□□ -0.83
Nkx2-1P50220 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.84□□□□□ -0.83
Nkx2-1P50220 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm7561-201ENSMUST00000211203 886 ntBASIC9.84□□□□□ -0.83
Nkx2-1P50220 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.84□□□□□ -0.83
Nkx2-1P50220 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.84□□□□□ -0.83
Nkx2-1P50220 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.84□□□□□ -0.83
Nkx2-1P50220 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nkx2-1P50220 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms