Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Brca1P48754 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Gm5449-201ENSMUST00000081132 357 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Brca1P48754 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Brca1P48754 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Brca1P48754 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Gm14234-201ENSMUST00000119539 845 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Gm24943-201ENSMUST00000158329 433 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.13□□□□□ -0.31
Brca1P48754 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Brca1P48754 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Brca1P48754 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Brca1P48754 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Brca1P48754 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Brca1P48754 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Brca1P48754 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Gm24279-201ENSMUST00000104236 131 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Brca1P48754 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Gm15197-201ENSMUST00000120526 478 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.13□□□□□ -0.31
Brca1P48754 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.13□□□□□ -0.31
Brca1P48754 Gm27390-201ENSMUST00000184516 176 ntBASIC13.13□□□□□ -0.31
Brca1P48754 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Gm2594-201ENSMUST00000214774 742 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.13□□□□□ -0.31
Brca1P48754 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brca1P48754 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brca1P48754 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca1P48754 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Brca1P48754 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Brca1P48754 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.12□□□□□ -0.31
Brca1P48754 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.12□□□□□ -0.31
Brca1P48754 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Brca1P48754 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Brca1P48754 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Brca1P48754 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Gm9369-201ENSMUST00000196009 733 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Gm43163-201ENSMUST00000196571 442 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Gm7525-201ENSMUST00000219425 454 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms