Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm12616-201ENSMUST00000118594 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.5□□□□□ -0.41
Rfx2P48379 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rfx2P48379 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12624-201ENSMUST00000177615 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12621-201ENSMUST00000177760 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12615-201ENSMUST00000177970 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12622-201ENSMUST00000177975 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12627-201ENSMUST00000178412 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12625-201ENSMUST00000179122 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12614-201ENSMUST00000179586 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm12613-201ENSMUST00000180323 382 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm44100-201ENSMUST00000204329 436 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.5□□□□□ -0.41
Rfx2P48379 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.49□□□□□ -0.41
Rfx2P48379 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.49□□□□□ -0.41
Rfx2P48379 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfx2P48379 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfx2P48379 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm12501-201ENSMUST00000119163 529 ntBASIC12.49□□□□□ -0.41
Rfx2P48379 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.49□□□□□ -0.41
Rfx2P48379 Rprl1-201ENSMUST00000158050 327 ntBASIC12.49□□□□□ -0.41
Rfx2P48379 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Rfx2P48379 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.49□□□□□ -0.41
Rfx2P48379 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.49□□□□□ -0.41
Rfx2P48379 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.49□□□□□ -0.41
Rfx2P48379 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Rfx2P48379 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfx2P48379 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.49□□□□□ -0.41
Rfx2P48379 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm26448-201ENSMUST00000082446 203 ntBASIC12.49□□□□□ -0.41
Rfx2P48379 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rfx2P48379 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.49□□□□□ -0.41
Rfx2P48379 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rfx2P48379 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rfx2P48379 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx2P48379 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx2P48379 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx2P48379 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx2P48379 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rfx2P48379 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx2P48379 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms