Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
VhlP40338 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.77□□□□□ -0.85
VhlP40338 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
VhlP40338 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.77□□□□□ -0.85
VhlP40338 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
VhlP40338 Gm12058-201ENSMUST00000118614 437 ntBASIC9.77□□□□□ -0.85
VhlP40338 Rprl1-201ENSMUST00000158050 327 ntBASIC9.77□□□□□ -0.85
VhlP40338 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Gm37201-201ENSMUST00000191845 523 ntBASIC9.77□□□□□ -0.85
VhlP40338 Gm18062-201ENSMUST00000208020 547 ntBASIC9.77□□□□□ -0.85
VhlP40338 Gm18055-201ENSMUST00000208254 547 ntBASIC9.77□□□□□ -0.85
VhlP40338 Gm5035-201ENSMUST00000215581 927 ntBASIC9.77□□□□□ -0.85
VhlP40338 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.77□□□□□ -0.85
VhlP40338 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
VhlP40338 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.77□□□□□ -0.85
VhlP40338 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
VhlP40338 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
VhlP40338 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
VhlP40338 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
VhlP40338 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
VhlP40338 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
VhlP40338 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Gm11700-201ENSMUST00000119409 403 ntBASIC9.76□□□□□ -0.85
VhlP40338 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.76□□□□□ -0.85
VhlP40338 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.76□□□□□ -0.85
VhlP40338 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Gm6114-201ENSMUST00000182472 968 ntBASIC9.76□□□□□ -0.85
VhlP40338 Gm27682-201ENSMUST00000183930 110 ntBASIC9.76□□□□□ -0.85
VhlP40338 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.76□□□□□ -0.85
VhlP40338 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.76□□□□□ -0.85
VhlP40338 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
VhlP40338 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.76□□□□□ -0.85
VhlP40338 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
VhlP40338 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.76□□□□□ -0.85
VhlP40338 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
VhlP40338 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.76□□□□□ -0.85
VhlP40338 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VhlP40338 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms