Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.46■□□□□ 0.39
Chd1P40201 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Gm14639-201ENSMUST00000120850 866 ntBASIC17.46■□□□□ 0.39
Chd1P40201 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Chd1P40201 Gm42687-201ENSMUST00000199075 164 ntBASIC17.46■□□□□ 0.39
Chd1P40201 AC116797.2-202ENSMUST00000223587 1017 ntBASIC17.46■□□□□ 0.39
Chd1P40201 Gm10238-201ENSMUST00000089689 408 ntBASIC17.46■□□□□ 0.39
Chd1P40201 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Gm4778-201ENSMUST00000098878 1098 ntBASIC17.46■□□□□ 0.39
Chd1P40201 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chd1P40201 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Gm14132-201ENSMUST00000117188 1719 ntBASIC17.45■□□□□ 0.38
Chd1P40201 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chd1P40201 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Gm23432-201ENSMUST00000157181 131 ntBASIC17.45■□□□□ 0.38
Chd1P40201 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chd1P40201 Gm21631-201ENSMUST00000195041 754 ntBASIC17.45■□□□□ 0.38
Chd1P40201 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Chd1P40201 AC129217.1-201ENSMUST00000225181 642 ntBASIC17.45■□□□□ 0.38
Chd1P40201 AC101205.2-201ENSMUST00000226206 715 ntBASIC17.45■□□□□ 0.38
Chd1P40201 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chd1P40201 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Gm9701-201ENSMUST00000077976 427 ntBASIC17.45■□□□□ 0.38
Chd1P40201 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC17.45■□□□□ 0.38
Chd1P40201 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd1P40201 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chd1P40201 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 CT010480.4-201ENSMUST00000224654 2283 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Gm11919-201ENSMUST00000117609 721 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Gm11380-201ENSMUST00000118067 560 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Gm22763-201ENSMUST00000158374 107 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 AC133517.1-201ENSMUST00000225825 594 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Gm28323-201ENSMUST00000186817 2499 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chd1P40201 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chd1P40201 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.44■□□□□ 0.38
Chd1P40201 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC17.44■□□□□ 0.38
Chd1P40201 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Chd1P40201 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Gm11952-201ENSMUST00000121172 821 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC17.44■□□□□ 0.38
Chd1P40201 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC17.44■□□□□ 0.38
Chd1P40201 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC17.44■□□□□ 0.38
Chd1P40201 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 BB187690-201ENSMUST00000198619 1176 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Gm45258-201ENSMUST00000210042 853 ntBASIC17.44■□□□□ 0.38
Chd1P40201 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Chd1P40201 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC17.44■□□□□ 0.38
Chd1P40201 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC17.44■□□□□ 0.38
Chd1P40201 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd1P40201 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chd1P40201 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chd1P40201 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chd1P40201 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chd1P40201 Gm17782-201ENSMUST00000174345 880 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms