Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.98□□□□□ -0.49
Fen1P39749 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Fen1P39749 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.98□□□□□ -0.49
Fen1P39749 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Gm8062-201ENSMUST00000139696 444 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Snora78-201ENSMUST00000158630 128 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.98□□□□□ -0.49
Fen1P39749 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Mir6420-201ENSMUST00000185032 102 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Gm44958-201ENSMUST00000203734 736 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Gm7561-201ENSMUST00000211203 886 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Gm45925-201ENSMUST00000218882 744 ntBASIC11.98□□□□□ -0.49
Fen1P39749 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.98□□□□□ -0.49
Fen1P39749 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.97□□□□□ -0.49
Fen1P39749 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.97□□□□□ -0.49
Fen1P39749 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Fen1P39749 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.97□□□□□ -0.49
Fen1P39749 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.97□□□□□ -0.49
Fen1P39749 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.97□□□□□ -0.49
Fen1P39749 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.97□□□□□ -0.49
Fen1P39749 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.97□□□□□ -0.49
Fen1P39749 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.97□□□□□ -0.49
Fen1P39749 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fen1P39749 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Gm10268-201ENSMUST00000085340 555 ntBASIC11.97□□□□□ -0.49
Fen1P39749 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fen1P39749 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Fen1P39749 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms