Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdh4P39038 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdh4P39038 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.43□□□□□ -0.58
Cdh4P39038 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.43□□□□□ -0.58
Cdh4P39038 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdh4P39038 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdh4P39038 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdh4P39038 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdh4P39038 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh4P39038 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.43□□□□□ -0.58
Cdh4P39038 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cdh4P39038 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Gm23949-201ENSMUST00000104027 127 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm26286-201ENSMUST00000104166 134 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Gm14028-201ENSMUST00000117434 479 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm15711-201ENSMUST00000118889 535 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm12036-201ENSMUST00000120008 530 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.42□□□□□ -0.58
Cdh4P39038 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Gm27341-201ENSMUST00000183570 106 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm7003-201ENSMUST00000195089 312 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm18038-201ENSMUST00000197900 485 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm18893-201ENSMUST00000198416 943 ntBASIC11.42□□□□□ -0.58
Cdh4P39038 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdh4P39038 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdh4P39038 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdh4P39038 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh4P39038 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh4P39038 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh4P39038 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdh4P39038 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Cdh4P39038 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.41□□□□□ -0.58
Cdh4P39038 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdh4P39038 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.41□□□□□ -0.58
Cdh4P39038 Gm12380-201ENSMUST00000119012 544 ntBASIC11.41□□□□□ -0.58
Cdh4P39038 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh4P39038 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh4P39038 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Cdh4P39038 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Cdh4P39038 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms