Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.34□□□□□ -0.27
Col2a1P28481 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Col2a1P28481 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.34□□□□□ -0.27
Col2a1P28481 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.34□□□□□ -0.27
Col2a1P28481 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.34□□□□□ -0.27
Col2a1P28481 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.34□□□□□ -0.27
Col2a1P28481 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.34□□□□□ -0.27
Col2a1P28481 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col2a1P28481 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col2a1P28481 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.34□□□□□ -0.27
Col2a1P28481 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.34□□□□□ -0.27
Col2a1P28481 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Col2a1P28481 Gm3726-201ENSMUST00000203110 785 ntBASIC13.34□□□□□ -0.27
Col2a1P28481 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.34□□□□□ -0.27
Col2a1P28481 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col2a1P28481 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.34□□□□□ -0.27
Col2a1P28481 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col2a1P28481 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Col2a1P28481 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col2a1P28481 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.33□□□□□ -0.27
Col2a1P28481 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col2a1P28481 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col2a1P28481 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.33□□□□□ -0.28
Col2a1P28481 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.33□□□□□ -0.28
Col2a1P28481 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.33□□□□□ -0.28
Col2a1P28481 Gm24992-201ENSMUST00000157412 130 ntBASIC13.33□□□□□ -0.28
Col2a1P28481 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Gm6407-201ENSMUST00000176468 549 ntBASIC13.33□□□□□ -0.28
Col2a1P28481 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.33□□□□□ -0.28
Col2a1P28481 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.33□□□□□ -0.28
Col2a1P28481 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col2a1P28481 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col2a1P28481 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.32□□□□□ -0.28
Col2a1P28481 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col2a1P28481 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col2a1P28481 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col2a1P28481 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col2a1P28481 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm25063-201ENSMUST00000104666 94 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm28324-201ENSMUST00000187913 264 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.32□□□□□ -0.28
Col2a1P28481 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.32□□□□□ -0.28
Col2a1P28481 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col2a1P28481 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.32□□□□□ -0.28
Col2a1P28481 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col2a1P28481 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms