Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Clk1P22518 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.21□□□□□ -0.61
Clk1P22518 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.21□□□□□ -0.61
Clk1P22518 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.21□□□□□ -0.61
Clk1P22518 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Clk1P22518 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Clk1P22518 Gm14726-201ENSMUST00000120623 896 ntBASIC11.21□□□□□ -0.61
Clk1P22518 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.21□□□□□ -0.61
Clk1P22518 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.21□□□□□ -0.61
Clk1P22518 Gm25043-201ENSMUST00000158604 212 ntBASIC11.21□□□□□ -0.61
Clk1P22518 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.21□□□□□ -0.61
Clk1P22518 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.21□□□□□ -0.61
Clk1P22518 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Clk1P22518 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.21□□□□□ -0.61
Clk1P22518 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.21□□□□□ -0.61
Clk1P22518 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clk1P22518 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Clk1P22518 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.21□□□□□ -0.62
Clk1P22518 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Clk1P22518 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.21□□□□□ -0.62
Clk1P22518 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clk1P22518 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clk1P22518 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clk1P22518 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.21□□□□□ -0.62
Clk1P22518 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Clk1P22518 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Clk1P22518 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clk1P22518 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.2□□□□□ -0.62
Clk1P22518 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Gm37593-201ENSMUST00000191669 3254 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Gm23912-201ENSMUST00000104687 87 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Clk1P22518 Gm15370-201ENSMUST00000117158 253 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Gm13875-201ENSMUST00000120162 282 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Clk1P22518 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.2□□□□□ -0.62
Clk1P22518 Gm38266-201ENSMUST00000194931 421 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Gm9823-201ENSMUST00000051212 327 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Gm45132-201ENSMUST00000207234 2542 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Clk1P22518 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Clk1P22518 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Clk1P22518 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.2□□□□□ -0.62
Clk1P22518 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Clk1P22518 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.2□□□□□ -0.62
Clk1P22518 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.2□□□□□ -0.62
Clk1P22518 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clk1P22518 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Clk1P22518 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms