Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Mir874-201ENSMUST00000104769 76 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm14739-201ENSMUST00000120424 802 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm27438-201ENSMUST00000183480 110 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm7467-201ENSMUST00000185173 652 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm28923-201ENSMUST00000187755 322 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm17790-201ENSMUST00000191545 1228 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm18692-201ENSMUST00000193047 511 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Prl7a1-203ENSMUST00000224852 1283 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 AC154634.2-201ENSMUST00000225983 1184 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Gm26831-201ENSMUST00000181458 1380 ntBASIC10.01□□□□□ -0.81
Tnfrsf9P20334 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm44401-201ENSMUST00000204462 2375 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Tmed9-203ENSMUST00000224741 1450 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm14109-201ENSMUST00000118814 309 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10□□□□□ -0.81
Tnfrsf9P20334 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm45224-201ENSMUST00000208203 414 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gm18387-201ENSMUST00000220333 702 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Tnfrsf9P20334 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tnfrsf9P20334 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10□□□□□ -0.81
Tnfrsf9P20334 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms