Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.71□□□□□ -0.86
Sdc1P18828 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Sdc1P18828 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.71□□□□□ -0.86
Sdc1P18828 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.71□□□□□ -0.86
Sdc1P18828 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.71□□□□□ -0.86
Sdc1P18828 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.71□□□□□ -0.86
Sdc1P18828 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.71□□□□□ -0.86
Sdc1P18828 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.71□□□□□ -0.86
Sdc1P18828 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sdc1P18828 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Sdc1P18828 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sdc1P18828 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm24830-201ENSMUST00000102024 166 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sdc1P18828 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sdc1P18828 Snord83b-201ENSMUST00000104546 94 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.7□□□□□ -0.86
Sdc1P18828 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.7□□□□□ -0.86
Sdc1P18828 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Sdc1P18828 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sdc1P18828 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm9063-201ENSMUST00000223299 582 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm10254-201ENSMUST00000052888 867 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Gm9797-201ENSMUST00000052902 613 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Gm24526-201ENSMUST00000082921 158 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Gm26232-201ENSMUST00000083360 166 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.7□□□□□ -0.86
Sdc1P18828 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sdc1P18828 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sdc1P18828 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sdc1P18828 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Sdc1P18828 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.69□□□□□ -0.86
Sdc1P18828 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
Sdc1P18828 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.69□□□□□ -0.86
Sdc1P18828 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Sdc1P18828 Gm11618-201ENSMUST00000117946 267 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms