Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm14892-201ENSMUST00000117636 267 ntBASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm11244-201ENSMUST00000121243 237 ntBASIC13.18□□□□□ -0.3
Hoxc6P10629 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm9192-201ENSMUST00000183221 985 ntBASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm35713-201ENSMUST00000210516 199 ntBASIC13.18□□□□□ -0.3
Hoxc6P10629 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm5805-201ENSMUST00000072779 456 ntBASIC13.18□□□□□ -0.3
Hoxc6P10629 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm8325-201ENSMUST00000099086 453 ntBASIC13.18□□□□□ -0.3
Hoxc6P10629 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hoxc6P10629 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.17□□□□□ -0.3
Hoxc6P10629 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.17□□□□□ -0.3
Hoxc6P10629 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc6P10629 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 Gm13022-201ENSMUST00000121181 285 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Gm18059-201ENSMUST00000208073 580 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxc6P10629 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxc6P10629 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.16□□□□□ -0.3
Hoxc6P10629 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc6P10629 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms