Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm27331-201ENSMUST00000183705 60 ntBASIC9.19□□□□□ -0.94
Ccl1P10146 Gm27702-201ENSMUST00000184512 56 ntBASIC9.19□□□□□ -0.94
Ccl1P10146 Gm38671-201ENSMUST00000200573 130 ntBASIC9.19□□□□□ -0.94
Ccl1P10146 Gm44958-201ENSMUST00000203734 736 ntBASIC9.19□□□□□ -0.94
Ccl1P10146 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.19□□□□□ -0.94
Ccl1P10146 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.19□□□□□ -0.94
Ccl1P10146 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Ccl1P10146 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Ccl1P10146 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccl1P10146 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Ccl1P10146 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.18□□□□□ -0.94
Ccl1P10146 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Ccl1P10146 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Ccl1P10146 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.18□□□□□ -0.94
Ccl1P10146 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.18□□□□□ -0.94
Ccl1P10146 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Gm43514-201ENSMUST00000198852 424 ntBASIC9.18□□□□□ -0.94
Ccl1P10146 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.18□□□□□ -0.94
Ccl1P10146 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.18□□□□□ -0.94
Ccl1P10146 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.18□□□□□ -0.94
Ccl1P10146 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Ccl1P10146 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Ccl1P10146 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.18□□□□□ -0.94
Ccl1P10146 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.18□□□□□ -0.94
Ccl1P10146 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ccl1P10146 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccl1P10146 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms