Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.37□□□□□ -0.75
UbbP0CG49 Gm5035-201ENSMUST00000215581 927 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
UbbP0CG49 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
UbbP0CG49 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm4984-201ENSMUST00000115987 360 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm13570-201ENSMUST00000140763 309 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm3890-201ENSMUST00000182416 207 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Gm38241-201ENSMUST00000192641 898 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Gm9794-201ENSMUST00000202370 423 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
UbbP0CG49 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.36□□□□□ -0.75
UbbP0CG49 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
UbbP0CG49 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
UbbP0CG49 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.36□□□□□ -0.75
UbbP0CG49 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.36□□□□□ -0.75
UbbP0CG49 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
UbbP0CG49 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.36□□□□□ -0.75
UbbP0CG49 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
UbbP0CG49 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UbbP0CG49 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.35□□□□□ -0.75
UbbP0CG49 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.35□□□□□ -0.75
UbbP0CG49 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Gm7809-201ENSMUST00000153199 742 ntBASIC10.35□□□□□ -0.75
UbbP0CG49 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.35□□□□□ -0.75
UbbP0CG49 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms