Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp6P0C0A3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Gm7722-201ENSMUST00000120646 741 ntBASIC12.97□□□□□ -0.33
Chmp6P0C0A3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.97□□□□□ -0.33
Chmp6P0C0A3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp6P0C0A3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.96□□□□□ -0.33
Chmp6P0C0A3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms