Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.06□□□□□ -0.16
Col3a1P08121 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.06□□□□□ -0.16
Col3a1P08121 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm26134-201ENSMUST00000178484 110 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.06□□□□□ -0.16
Col3a1P08121 Mir6407-201ENSMUST00000184510 101 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.06□□□□□ -0.16
Col3a1P08121 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col3a1P08121 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.05□□□□□ -0.16
Col3a1P08121 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col3a1P08121 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col3a1P08121 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.05□□□□□ -0.16
Col3a1P08121 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Col3a1P08121 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col3a1P08121 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col3a1P08121 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Gm5996-201ENSMUST00000211110 718 ntBASIC14.05□□□□□ -0.16
Col3a1P08121 Gm45594-201ENSMUST00000211717 241 ntBASIC14.05□□□□□ -0.16
Col3a1P08121 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Col3a1P08121 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.05□□□□□ -0.16
Col3a1P08121 Gm10263-201ENSMUST00000085163 300 ntBASIC14.05□□□□□ -0.16
Col3a1P08121 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col3a1P08121 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.05□□□□□ -0.16
Col3a1P08121 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col3a1P08121 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Col3a1P08121 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Col3a1P08121 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.04□□□□□ -0.16
Col3a1P08121 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col3a1P08121 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.04□□□□□ -0.16
Col3a1P08121 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.04□□□□□ -0.16
Col3a1P08121 Gm22442-201ENSMUST00000157256 144 ntBASIC14.04□□□□□ -0.16
Col3a1P08121 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.04□□□□□ -0.16
Col3a1P08121 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.04□□□□□ -0.16
Col3a1P08121 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.04□□□□□ -0.16
Col3a1P08121 Lect2-202ENSMUST00000225183 823 ntBASIC14.04□□□□□ -0.16
Col3a1P08121 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.04□□□□□ -0.16
Col3a1P08121 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col3a1P08121 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.03□□□□□ -0.16
Col3a1P08121 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.03□□□□□ -0.16
Col3a1P08121 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.03□□□□□ -0.16
Col3a1P08121 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col3a1P08121 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Gm14892-201ENSMUST00000117636 267 ntBASIC14.03□□□□□ -0.16
Col3a1P08121 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms