Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm22133-201ENSMUST00000102082 109 ntBASIC10.01□□□□□ -0.81
Hoxa3P02831 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm11331-201ENSMUST00000119764 288 ntBASIC10.01□□□□□ -0.81
Hoxa3P02831 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm23699-201ENSMUST00000158835 135 ntBASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm27530-201ENSMUST00000184096 98 ntBASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm9555-201ENSMUST00000200908 583 ntBASIC10.01□□□□□ -0.81
Hoxa3P02831 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hoxa3P02831 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.01□□□□□ -0.81
Hoxa3P02831 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Gm2420-201ENSMUST00000119864 2149 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10□□□□□ -0.81
Hoxa3P02831 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10□□□□□ -0.81
Hoxa3P02831 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Hoxa3P02831 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10□□□□□ -0.81
Hoxa3P02831 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10□□□□□ -0.81
Hoxa3P02831 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms