Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.26□□□□□ -0.77
H3f3cP02301 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.26□□□□□ -0.77
H3f3cP02301 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.26□□□□□ -0.77
H3f3cP02301 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.26□□□□□ -0.77
H3f3cP02301 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
H3f3cP02301 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H3f3cP02301 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
H3f3cP02301 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.25□□□□□ -0.77
H3f3cP02301 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.25□□□□□ -0.77
H3f3cP02301 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm13296-201ENSMUST00000117854 997 ntBASIC10.25□□□□□ -0.77
H3f3cP02301 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.25□□□□□ -0.77
H3f3cP02301 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm26361-201ENSMUST00000158868 186 ntBASIC10.25□□□□□ -0.77
H3f3cP02301 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H3f3cP02301 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H3f3cP02301 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.25□□□□□ -0.77
H3f3cP02301 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm9257-201ENSMUST00000221254 232 ntBASIC10.25□□□□□ -0.77
H3f3cP02301 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
H3f3cP02301 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H3f3cP02301 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.25□□□□□ -0.77
H3f3cP02301 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H3f3cP02301 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.25□□□□□ -0.77
H3f3cP02301 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
H3f3cP02301 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H3f3cP02301 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
H3f3cP02301 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Gm13996-201ENSMUST00000118456 430 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
H3f3cP02301 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.24□□□□□ -0.77
H3f3cP02301 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.24□□□□□ -0.77
H3f3cP02301 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.24□□□□□ -0.77
H3f3cP02301 Gm4857-201ENSMUST00000192718 785 ntBASIC10.24□□□□□ -0.77
H3f3cP02301 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H3f3cP02301 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.24□□□□□ -0.77
H3f3cP02301 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.24□□□□□ -0.77
H3f3cP02301 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.24□□□□□ -0.77
H3f3cP02301 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.24□□□□□ -0.77
H3f3cP02301 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
H3f3cP02301 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H3f3cP02301 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms