Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.25□□□□□ -0.45
CopeO89079 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CopeO89079 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.25□□□□□ -0.45
CopeO89079 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CopeO89079 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CopeO89079 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CopeO89079 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CopeO89079 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.25□□□□□ -0.45
CopeO89079 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CopeO89079 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CopeO89079 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Gm10434-201ENSMUST00000101158 471 ntBASIC12.24□□□□□ -0.45
CopeO89079 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CopeO89079 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
CopeO89079 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CopeO89079 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Gm13316-201ENSMUST00000140537 691 ntBASIC12.24□□□□□ -0.45
CopeO89079 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.24□□□□□ -0.45
CopeO89079 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.24□□□□□ -0.45
CopeO89079 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CopeO89079 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.24□□□□□ -0.45
CopeO89079 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.24□□□□□ -0.45
CopeO89079 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.24□□□□□ -0.45
CopeO89079 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.24□□□□□ -0.45
CopeO89079 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopeO89079 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CopeO89079 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.23□□□□□ -0.45
CopeO89079 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CopeO89079 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Gm11700-201ENSMUST00000119409 403 ntBASIC12.23□□□□□ -0.45
CopeO89079 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.23□□□□□ -0.45
CopeO89079 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.23□□□□□ -0.45
CopeO89079 Gm25043-201ENSMUST00000158604 212 ntBASIC12.23□□□□□ -0.45
CopeO89079 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Gm2546-201ENSMUST00000182630 991 ntBASIC12.23□□□□□ -0.45
CopeO89079 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms