Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ldb2O55203 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ldb2O55203 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ldb2O55203 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ldb2O55203 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.83□□□□□ -0.52
Ldb2O55203 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.83□□□□□ -0.52
Ldb2O55203 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ldb2O55203 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ldb2O55203 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.83□□□□□ -0.52
Ldb2O55203 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.83□□□□□ -0.52
Ldb2O55203 Gm11660-201ENSMUST00000120955 412 ntBASIC11.83□□□□□ -0.52
Ldb2O55203 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.83□□□□□ -0.52
Ldb2O55203 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ldb2O55203 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.83□□□□□ -0.52
Ldb2O55203 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.83□□□□□ -0.52
Ldb2O55203 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.83□□□□□ -0.52
Ldb2O55203 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Ldb2O55203 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ldb2O55203 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.83□□□□□ -0.52
Ldb2O55203 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ldb2O55203 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.83□□□□□ -0.52
Ldb2O55203 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ldb2O55203 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.83□□□□□ -0.52
Ldb2O55203 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.82□□□□□ -0.52
Ldb2O55203 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ldb2O55203 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Ldb2O55203 Gm11509-201ENSMUST00000117358 325 ntBASIC11.82□□□□□ -0.52
Ldb2O55203 Gm12380-201ENSMUST00000119012 544 ntBASIC11.82□□□□□ -0.52
Ldb2O55203 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ldb2O55203 Gm16570-201ENSMUST00000161951 436 ntBASIC11.82□□□□□ -0.52
Ldb2O55203 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Gm45186-201ENSMUST00000206874 478 ntBASIC11.82□□□□□ -0.52
Ldb2O55203 Gm4157-201ENSMUST00000211647 679 ntBASIC11.82□□□□□ -0.52
Ldb2O55203 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.82□□□□□ -0.52
Ldb2O55203 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ldb2O55203 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.82□□□□□ -0.52
Ldb2O55203 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Ldb2O55203 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.82□□□□□ -0.52
Ldb2O55203 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.82□□□□□ -0.52
Ldb2O55203 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ldb2O55203 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.82□□□□□ -0.52
Ldb2O55203 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ldb2O55203 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.81□□□□□ -0.52
Ldb2O55203 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Ldb2O55203 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ldb2O55203 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.81□□□□□ -0.52
Ldb2O55203 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ldb2O55203 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms