Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Atf6bO35451 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Atf6bO35451 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Atf6bO35451 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Atf6bO35451 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Atf6bO35451 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Atf6bO35451 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Atf6bO35451 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Atf6bO35451 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Atf6bO35451 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.39□□□□□ -0.75
Atf6bO35451 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Atf6bO35451 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Atf6bO35451 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Atf6bO35451 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Gm9230-201ENSMUST00000188228 532 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.39□□□□□ -0.75
Atf6bO35451 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Atf6bO35451 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Atf6bO35451 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.39□□□□□ -0.75
Atf6bO35451 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.39□□□□□ -0.75
Atf6bO35451 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Atf6bO35451 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Atf6bO35451 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.38□□□□□ -0.75
Atf6bO35451 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.38□□□□□ -0.75
Atf6bO35451 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.38□□□□□ -0.75
Atf6bO35451 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.38□□□□□ -0.75
Atf6bO35451 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.38□□□□□ -0.75
Atf6bO35451 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.38□□□□□ -0.75
Atf6bO35451 Gm45598-202ENSMUST00000210719 986 ntBASIC10.38□□□□□ -0.75
Atf6bO35451 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.38□□□□□ -0.75
Atf6bO35451 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.38□□□□□ -0.75
Atf6bO35451 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.38□□□□□ -0.75
Atf6bO35451 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Atf6bO35451 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Atf6bO35451 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms