Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm40466-201ENSMUST00000212174 422 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
Efnb3O35393 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Efnb3O35393 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Efnb3O35393 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.41□□□□□ -0.9
Efnb3O35393 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Efnb3O35393 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.41□□□□□ -0.9
Efnb3O35393 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Efnb3O35393 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.4□□□□□ -0.9
Efnb3O35393 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Efnb3O35393 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Efnb3O35393 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Gm12502-201ENSMUST00000120197 444 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.4□□□□□ -0.9
Efnb3O35393 Gm1335-201ENSMUST00000121653 386 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Mir1982-201ENSMUST00000157368 74 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Gm27682-201ENSMUST00000183930 110 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.4□□□□□ -0.9
Efnb3O35393 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Gm10268-201ENSMUST00000085340 555 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.4□□□□□ -0.9
Efnb3O35393 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Efnb3O35393 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Efnb3O35393 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Efnb3O35393 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Efnb3O35393 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.4□□□□□ -0.9
Efnb3O35393 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Efnb3O35393 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Efnb3O35393 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Efnb3O35393 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.4□□□□□ -0.91
Efnb3O35393 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Efnb3O35393 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Efnb3O35393 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.39□□□□□ -0.91
Efnb3O35393 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms