Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm26272-201ENSMUST00000179241 132 ntBASIC17.98■□□□□ 0.47
Polr1aO35134 Gm5870-201ENSMUST00000196461 282 ntBASIC17.98■□□□□ 0.47
Polr1aO35134 Gm43778-201ENSMUST00000199438 199 ntBASIC17.98■□□□□ 0.47
Polr1aO35134 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC17.98■□□□□ 0.47
Polr1aO35134 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Polr1aO35134 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC17.98■□□□□ 0.47
Polr1aO35134 Mir453-201ENSMUST00000104732 82 ntBASIC17.98■□□□□ 0.47
Polr1aO35134 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Gm14398-201ENSMUST00000117287 1073 ntBASIC17.98■□□□□ 0.47
Polr1aO35134 Gm12943-201ENSMUST00000119616 210 ntBASIC17.98■□□□□ 0.47
Polr1aO35134 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Gm25830-201ENSMUST00000158923 132 ntBASIC17.98■□□□□ 0.47
Polr1aO35134 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC17.98■□□□□ 0.47
Polr1aO35134 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Polr1aO35134 AC122840.1-201ENSMUST00000220915 3334 ntBASIC17.97■□□□□ 0.47
Polr1aO35134 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Polr1aO35134 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Polr1aO35134 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC17.97■□□□□ 0.47
Polr1aO35134 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC17.97■□□□□ 0.47
Polr1aO35134 Gm9133-201ENSMUST00000118289 540 ntBASIC17.97■□□□□ 0.47
Polr1aO35134 Gm15196-201ENSMUST00000121406 482 ntBASIC17.97■□□□□ 0.47
Polr1aO35134 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC17.97■□□□□ 0.47
Polr1aO35134 Gm9916-201ENSMUST00000192943 1228 ntBASIC17.97■□□□□ 0.47
Polr1aO35134 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC17.97■□□□□ 0.47
Polr1aO35134 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC17.97■□□□□ 0.47
Polr1aO35134 Id2-203ENSMUST00000222667 958 ntBASIC17.97■□□□□ 0.47
Polr1aO35134 Capsl-202ENSMUST00000226688 739 ntBASIC17.97■□□□□ 0.47
Polr1aO35134 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Gm8181-201ENSMUST00000062242 669 ntBASIC17.97■□□□□ 0.47
Polr1aO35134 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Polr1aO35134 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Polr1aO35134 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Polr1aO35134 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Polr1aO35134 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Polr1aO35134 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Polr1aO35134 Gm15617-201ENSMUST00000118973 771 ntBASIC17.96■□□□□ 0.47
Polr1aO35134 Gm15620-201ENSMUST00000122949 270 ntBASIC17.96■□□□□ 0.47
Polr1aO35134 Gm4982-201ENSMUST00000160440 1098 ntBASIC17.96■□□□□ 0.47
Polr1aO35134 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Gm9487-201ENSMUST00000216600 472 ntBASIC17.96■□□□□ 0.47
Polr1aO35134 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Polr1aO35134 Gm18499-201ENSMUST00000220808 1021 ntBASIC17.96■□□□□ 0.47
Polr1aO35134 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Polr1aO35134 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Polr1aO35134 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Polr1aO35134 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Polr1aO35134 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Polr1aO35134 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr1aO35134 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr1aO35134 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr1aO35134 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC17.95■□□□□ 0.46
Polr1aO35134 Gm18801-201ENSMUST00000186616 536 ntBASIC17.95■□□□□ 0.46
Polr1aO35134 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Polr1aO35134 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC17.95■□□□□ 0.46
Polr1aO35134 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr1aO35134 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr1aO35134 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms