Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Tcof1O08784 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tcof1O08784 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tcof1O08784 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tcof1O08784 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tcof1O08784 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tcof1O08784 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tcof1O08784 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tcof1O08784 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.92□□□□□ -0.18
Tcof1O08784 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.92□□□□□ -0.18
Tcof1O08784 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.92□□□□□ -0.18
Tcof1O08784 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Gm11941-201ENSMUST00000119904 610 ntBASIC13.92□□□□□ -0.18
Tcof1O08784 Gm11660-201ENSMUST00000120955 412 ntBASIC13.92□□□□□ -0.18
Tcof1O08784 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.92□□□□□ -0.18
Tcof1O08784 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.92□□□□□ -0.18
Tcof1O08784 Gm8100-201ENSMUST00000182906 988 ntBASIC13.92□□□□□ -0.18
Tcof1O08784 Gm9192-201ENSMUST00000183221 985 ntBASIC13.92□□□□□ -0.18
Tcof1O08784 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Tcof1O08784 Gm37246-201ENSMUST00000192665 835 ntBASIC13.92□□□□□ -0.18
Tcof1O08784 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.92□□□□□ -0.18
Tcof1O08784 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Tcof1O08784 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.92□□□□□ -0.18
Tcof1O08784 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.92□□□□□ -0.18
Tcof1O08784 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Tcof1O08784 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tcof1O08784 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tcof1O08784 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
Tcof1O08784 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Gm13408-201ENSMUST00000119822 798 ntBASIC13.91□□□□□ -0.18
Tcof1O08784 Gm13935-201ENSMUST00000121859 798 ntBASIC13.91□□□□□ -0.18
Tcof1O08784 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Tcof1O08784 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.91□□□□□ -0.18
Tcof1O08784 Gm2965-201ENSMUST00000198365 343 ntBASIC13.91□□□□□ -0.18
Tcof1O08784 Gm19287-201ENSMUST00000203190 358 ntBASIC13.91□□□□□ -0.18
Tcof1O08784 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Tcof1O08784 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Tcof1O08784 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tcof1O08784 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tcof1O08784 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.9□□□□□ -0.18
Tcof1O08784 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.9□□□□□ -0.18
Tcof1O08784 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.9□□□□□ -0.18
Tcof1O08784 Gm5051-201ENSMUST00000204085 485 ntBASIC13.9□□□□□ -0.18
Tcof1O08784 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.9□□□□□ -0.18
Tcof1O08784 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.9□□□□□ -0.18
Tcof1O08784 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tcof1O08784 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms