Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Rpl6l-201ENSMUST00000171120 871 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm1840-201ENSMUST00000051687 1432 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm40-201ENSMUST00000122131 660 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm19014-201ENSMUST00000184828 1189 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm28281-201ENSMUST00000185658 187 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm44420-201ENSMUST00000203669 490 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm45620-201ENSMUST00000209980 468 ntTSL 3 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm10291-201ENSMUST00000094175 999 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm5535-201ENSMUST00000099292 1743 ntTSL 2 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm19863-201ENSMUST00000192480 2218 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm37736-201ENSMUST00000193564 2802 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm5639-201ENSMUST00000122305 2403 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm18362-201ENSMUST00000221786 529 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 AC164429.1-201ENSMUST00000224210 518 ntBASIC6.42□□□□□ -1.38
Herc1E9PZP8 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC6.42□□□□□ -1.38
Herc1E9PZP8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Gm4753-201ENSMUST00000188327 1255 ntBASIC6.41□□□□□ -1.38
Herc1E9PZP8 Magea8-201ENSMUST00000070141 1646 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Herc1E9PZP8 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms