Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Gm8815-201ENSMUST00000173809 620 ntBASIC11.78□□□□□ -0.52
Srp54bE9PXC0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.78□□□□□ -0.52
Srp54bE9PXC0 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp54bE9PXC0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.77□□□□□ -0.52
Srp54bE9PXC0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm15207-201ENSMUST00000119259 442 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm22144-201ENSMUST00000157402 102 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm19287-201ENSMUST00000203190 358 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm44545-201ENSMUST00000208262 746 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm9132-201ENSMUST00000210182 832 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Srp54bE9PXC0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms